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A YidC-like protein in the archaeal plasma membrane

Organism: Methanococcus jannaschii
Model: Experimental
Representation: Coarse-grained
Type: α-helical

Pfam Acc: PF02096
PDB ID: 5C8J


Membrane assignment:

Output PDB file Download

Hydrophobic thickness = 29.0 Å

Number of TM segments = 1

Sequence positions:
I: 492-525

Tilt angles:
I - Segment: 492-525 - Tilt: 20.2°


Structural assessment:

MAIDEN score = -2.0109
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.


Scores for all residue pairs Download




[creation date: Sep-08-2016]