Human Glycine Receptor alpha-3 Bound to Strychnine
Organism: Homo sapiens
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF02932
PDB ID: 5CFB
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 23.4 Å
Number of TM segments = 20
Sequence positions:
A: 223-236|241-256|281-295|314-329
C: 899-912|916-930|957-973|988-1003
B: 560-574|580-595|619-634|656-671
E: 1570-1583|1585-1599|1628-1643|1655-1670
D: 1239-1252|1254-1268|1298-1313|1315-1331
Tilt angles:
A - Segment: 223-236 - Tilt: 2.0°
A - Segment: 241-256 - Tilt: 8.1°
A - Segment: 281-295 - Tilt: 13.1°
A - Segment: 314-329 - Tilt: 14.4°
C - Segment: 899-912 - Tilt: 26.8°
C - Segment: 916-930 - Tilt: 14.2°
C - Segment: 957-973 - Tilt: 35.8°
C - Segment: 988-1003 - Tilt: 27.1°
B - Segment: 560-574 - Tilt: 10.3°
B - Segment: 580-595 - Tilt: 11.1°
B - Segment: 619-634 - Tilt: 15.8°
B - Segment: 656-671 - Tilt: 20.7°
E - Segment: 1570-1583 - Tilt: 18.6°
E - Segment: 1585-1599 - Tilt: 17.7°
E - Segment: 1628-1643 - Tilt: 17.4°
E - Segment: 1655-1670 - Tilt: 10.0°
D - Segment: 1239-1252 - Tilt: 30.4°
D - Segment: 1254-1268 - Tilt: 19.0°
D - Segment: 1298-1313 - Tilt: 21.5°
D - Segment: 1315-1331 - Tilt: 18.0°
Structural assessment:
MAIDEN score = -180.2955
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]