Outer membrane protein (porin)
Organism: Snodgrassella alvi
Model: Theoretical ORION
Representation: Atomistic
Type: β-sheet
UniProtKB AC: A0A080K580
Pfam ID: PF00267
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.1 Å
Number of TM segments = 14
Sequence positions:
: 30-40|48-59|71-78|82-105|123-129|136-141|166-171|178-185|218-224|231-238|258-265|270-278|296-305|308-316
Tilt angles:
- Segment: 30-40 - Tilt: 57.3°
- Segment: 48-59 - Tilt: 57.1°
- Segment: 71-78 - Tilt: 38.6°
- Segment: 82-105 - Tilt: 59.5°
- Segment: 123-129 - Tilt: 22.0°
- Segment: 136-141 - Tilt: 26.2°
- Segment: 166-171 - Tilt: 32.2°
- Segment: 178-185 - Tilt: 34.4°
- Segment: 218-224 - Tilt: 33.9°
- Segment: 231-238 - Tilt: 42.1°
- Segment: 258-265 - Tilt: 40.1°
- Segment: 270-278 - Tilt: 48.6°
- Segment: 296-305 - Tilt: 50.6°
- Segment: 308-316 - Tilt: 49.4°
Structural assessment:
MAIDEN score = 48.4953
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]