porin
Organism: Vibrio sp.
Model: Theoretical ORION
Representation: Atomistic
Type: β-sheet
UniProtKB AC: A0A099KVX0
Pfam ID: PF07396
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.0 Å
Number of TM segments = 16
Sequence positions:
: 44-53|68-78|87-98|102-112|119-149|153-167|175-182|195-202|213-220|273-280|286-293|310-317|347-354|378-385|391-399|416-424
Tilt angles:
- Segment: 44-53 - Tilt: 48.4°
- Segment: 68-78 - Tilt: 52.9°
- Segment: 87-98 - Tilt: 27.2°
- Segment: 102-112 - Tilt: 31.0°
- Segment: 119-149 - Tilt: 45.8°
- Segment: 153-167 - Tilt: 34.6°
- Segment: 175-182 - Tilt: 36.1°
- Segment: 195-202 - Tilt: 37.8°
- Segment: 213-220 - Tilt: 35.3°
- Segment: 273-280 - Tilt: 33.5°
- Segment: 286-293 - Tilt: 32.9°
- Segment: 310-317 - Tilt: 32.6°
- Segment: 347-354 - Tilt: 33.4°
- Segment: 378-385 - Tilt: 34.7°
- Segment: 391-399 - Tilt: 40.7°
- Segment: 416-424 - Tilt: 43.3°
Structural assessment:
MAIDEN score = 3.4118
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]