Transmembrane transport protein
Organism: Bordetella pertussis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: A0A0A0XH83
Pfam Acc: PF07690
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.9 Å
Number of TM segments = 10
Sequence positions:
: 51-67|75-90|105-122|136-149|168-185|219-233|253-268|274-290|306-320|339-356
Tilt angles:
- Segment: 51-67 - Tilt: 32.4°
- Segment: 75-90 - Tilt: 14.9°
- Segment: 105-122 - Tilt: 45.3°
- Segment: 136-149 - Tilt: 17.6°
- Segment: 168-185 - Tilt: 24.6°
- Segment: 219-233 - Tilt: 24.2°
- Segment: 253-268 - Tilt: 23.8°
- Segment: 274-290 - Tilt: 20.3°
- Segment: 306-320 - Tilt: 15.7°
- Segment: 339-356 - Tilt: 34.6°
Structural assessment:
MAIDEN score = 11.1217
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]