Transmembrane transport protein
Organism: Bordetella pertussis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: A0A0A0XJZ2
Pfam Acc: PF07690
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 30.6 Å
Number of TM segments = 11
Sequence positions:
: 18-36|48-69|78-96|100-118|139-163|165-181|213-242|247-268|278-296|298-325|337-356
Tilt angles:
- Segment: 18-36 - Tilt: 5.6°
- Segment: 48-69 - Tilt: 26.3°
- Segment: 78-96 - Tilt: 12.7°
- Segment: 100-118 - Tilt: 5.8°
- Segment: 139-163 - Tilt: 33.3°
- Segment: 165-181 - Tilt: 4.7°
- Segment: 213-242 - Tilt: 43.6°
- Segment: 247-268 - Tilt: 36.2°
- Segment: 278-296 - Tilt: 26.5°
- Segment: 298-325 - Tilt: 38.8°
- Segment: 337-356 - Tilt: 19.7°
Structural assessment:
MAIDEN score = -23.2677
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]