Putative transmembrane transport protein
Organism: Bordetella bronchiseptica
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: A0A0C6P371
Pfam Acc: PF07690
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 11
Sequence positions:
: 18-30|53-66|79-91|105-117|139-150|169-181|214-234|253-268|278-291|313-327|341-350
Tilt angles:
- Segment: 18-30 - Tilt: 12.7°
- Segment: 53-66 - Tilt: 26.1°
- Segment: 79-91 - Tilt: 13.3°
- Segment: 105-117 - Tilt: 27.2°
- Segment: 139-150 - Tilt: 35.5°
- Segment: 169-181 - Tilt: 4.8°
- Segment: 214-234 - Tilt: 48.6°
- Segment: 253-268 - Tilt: 37.0°
- Segment: 278-291 - Tilt: 16.8°
- Segment: 313-327 - Tilt: 48.2°
- Segment: 341-350 - Tilt: 9.2°
Structural assessment:
MAIDEN score = -27.6810
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]