Transmembrane secretion effector
Organism: Leptospira interrogans
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: A0A0F6HWL9
Pfam Acc: PF05977
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 28.2 Å
Number of TM segments = 9
Sequence positions:
: 129-150|157-172|186-203|230-254|267-286|297-316|318-341|353-372|387-406
Tilt angles:
- Segment: 129-150 - Tilt: 28.9°
- Segment: 157-172 - Tilt: 24.3°
- Segment: 186-203 - Tilt: 36.1°
- Segment: 230-254 - Tilt: 45.5°
- Segment: 267-286 - Tilt: 19.7°
- Segment: 297-316 - Tilt: 26.1°
- Segment: 318-341 - Tilt: 42.3°
- Segment: 353-372 - Tilt: 22.1°
- Segment: 387-406 - Tilt: 14.3°
Structural assessment:
MAIDEN score = -42.7676
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]