porin
Organism: Vibrio sp.
Model: Theoretical ORION
Representation: Atomistic
Type: β-sheet
UniProtKB AC: A0A0H2MS57
Pfam ID: PF03573
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 10
Sequence positions:
: 11-17|38-44|58-64|73-80|150-159|185-192|204-212|214-223|233-243|389-395
Tilt angles:
- Segment: 11-17 - Tilt: 23.7°
- Segment: 38-44 - Tilt: 28.9°
- Segment: 58-64 - Tilt: 27.7°
- Segment: 73-80 - Tilt: 35.4°
- Segment: 150-159 - Tilt: 47.9°
- Segment: 185-192 - Tilt: 36.0°
- Segment: 204-212 - Tilt: 43.5°
- Segment: 214-223 - Tilt: 51.8°
- Segment: 233-243 - Tilt: 60.8°
- Segment: 389-395 - Tilt: 29.6°
Structural assessment:
MAIDEN score = -2.4729
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]