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Cytochrome c biogenesis protein, transmembrane region

Organism: Desulfovibrio vulgaris
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical

UniProtKB AC: A0A0H3A9J1
Pfam Acc: PF02683


Membrane assignment:

Output PDB file Download

Hydrophobic thickness = 20.0 Å

Number of TM segments = 4

Sequence positions:
: 585-592|597-620|622-629|632-652

Tilt angles:
- Segment: 585-592 - Tilt: 37.0°
- Segment: 597-620 - Tilt: 50.2°
- Segment: 622-629 - Tilt: 39.6°
- Segment: 632-652 - Tilt: 17.1°


Structural assessment:

MAIDEN score = 38.6370
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.


Scores for all residue pairs Download




[creation date: Sep-08-2016]