YbbM seven transmembrane helix protein
Organism: Edwardsiella tarda
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: A0A0H3DTQ6
Pfam Acc: PF03649
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 30.0 Å
Number of TM segments = 4
Sequence positions:
: 96-116|121-146|161-189|192-221
Tilt angles:
- Segment: 96-116 - Tilt: 29.1°
- Segment: 121-146 - Tilt: 35.3°
- Segment: 161-189 - Tilt: 41.8°
- Segment: 192-221 - Tilt: 31.7°
Structural assessment:
MAIDEN score = -10.9493
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]