Transmembrane protein YgaY
Organism: Pantoea ananatis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: A0A0H3L1D2
Pfam Acc: PF07690
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 22.0 Å
Number of TM segments = 4
Sequence positions:
: 109-120|128-148|152-165|173-186
Tilt angles:
- Segment: 109-120 - Tilt: 38.3°
- Segment: 128-148 - Tilt: 34.2°
- Segment: 152-165 - Tilt: 26.4°
- Segment: 173-186 - Tilt: 17.5°
Structural assessment:
MAIDEN score = -14.4724
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]