Putative transmembrane transport protein
Organism: Bordetella bronchiseptica
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: A0A0H3LPE6
Pfam Acc: PF07690
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 24.3 Å
Number of TM segments = 11
Sequence positions:
: 30-44|62-80|88-105|114-128|153-174|176-189|224-259|265-282|300-321|324-345|359-376
Tilt angles:
- Segment: 30-44 - Tilt: 20.7°
- Segment: 62-80 - Tilt: 39.1°
- Segment: 88-105 - Tilt: 39.2°
- Segment: 114-128 - Tilt: 18.8°
- Segment: 153-174 - Tilt: 41.2°
- Segment: 176-189 - Tilt: 26.6°
- Segment: 224-259 - Tilt: 62.7°
- Segment: 265-282 - Tilt: 36.7°
- Segment: 300-321 - Tilt: 45.7°
- Segment: 324-345 - Tilt: 59.7°
- Segment: 359-376 - Tilt: 38.9°
Structural assessment:
MAIDEN score = -6.3421
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]