Transport transmembrane protein
Organism: Bartonella quintana
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: A0A0H3LTD5
Pfam Acc: PF05977
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 26.0 Å
Number of TM segments = 10
Sequence positions:
: 24-39|48-64|85-103|105-121|225-248|255-271|290-307|309-328|354-370|376-395
Tilt angles:
- Segment: 24-39 - Tilt: 10.1°
- Segment: 48-64 - Tilt: 24.2°
- Segment: 85-103 - Tilt: 10.2°
- Segment: 105-121 - Tilt: 10.9°
- Segment: 225-248 - Tilt: 47.8°
- Segment: 255-271 - Tilt: 15.5°
- Segment: 290-307 - Tilt: 24.3°
- Segment: 309-328 - Tilt: 32.7°
- Segment: 354-370 - Tilt: 11.4°
- Segment: 376-395 - Tilt: 30.9°
Structural assessment:
MAIDEN score = -21.2547
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]