ABC transporter transmembrane region
Organism: Vibrio cholerae
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: A0A0H3Q1W4
Pfam Acc: PF00664
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 6
Sequence positions:
: 508-527|582-596|602-614|619-624|640-653|656-662
Tilt angles:
- Segment: 508-527 - Tilt: 10.5°
- Segment: 582-596 - Tilt: 29.1°
- Segment: 602-614 - Tilt: 23.3°
- Segment: 619-624 - Tilt: 8.0°
- Segment: 640-653 - Tilt: 5.1°
- Segment: 656-662 - Tilt: 19.9°
Structural assessment:
MAIDEN score = 0.6225
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]