TonB-dependent receptor, partial
Organism: Yersinia pestis
Model: Theoretical ORION
Representation: Atomistic
Type: β-sheet
UniProtKB AC: A0A0M1VAI7
Pfam ID: PF00593
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 28.0 Å
Number of TM segments = 22
Sequence positions:
: 118-129|132-142|145-157|161-171|184-195|199-208|250-260|264-273|311-321|328-337|389-400|402-412|433-443|446-456|476-486|489-500|531-542|544-554|574-584|590-600|622-633|635-646
Tilt angles:
- Segment: 118-129 - Tilt: 46.2°
- Segment: 132-142 - Tilt: 41.2°
- Segment: 145-157 - Tilt: 45.9°
- Segment: 161-171 - Tilt: 42.9°
- Segment: 184-195 - Tilt: 46.0°
- Segment: 199-208 - Tilt: 40.3°
- Segment: 250-260 - Tilt: 39.6°
- Segment: 264-273 - Tilt: 35.0°
- Segment: 311-321 - Tilt: 39.8°
- Segment: 328-337 - Tilt: 36.2°
- Segment: 389-400 - Tilt: 41.2°
- Segment: 402-412 - Tilt: 37.7°
- Segment: 433-443 - Tilt: 43.7°
- Segment: 446-456 - Tilt: 31.8°
- Segment: 476-486 - Tilt: 31.9°
- Segment: 489-500 - Tilt: 24.8°
- Segment: 531-542 - Tilt: 37.1°
- Segment: 544-554 - Tilt: 36.5°
- Segment: 574-584 - Tilt: 38.1°
- Segment: 590-600 - Tilt: 38.3°
- Segment: 622-633 - Tilt: 44.7°
- Segment: 635-646 - Tilt: 44.4°
Structural assessment:
MAIDEN score = 118.8048
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]