Outer membrane protein D1
Organism: Streptococcus pneumoniae
Model: Theoretical ORION
Representation: Atomistic
Type: β-sheet
UniProtKB AC: A0A0T8L0X6
Pfam ID: PF07396
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.0 Å
Number of TM segments = 15
Sequence positions:
: 28-42|56-70|72-82|88-98|101-141|144-149|157-162|176-182|196-201|246-252|262-268|281-287|322-329|350-359|365-377
Tilt angles:
- Segment: 28-42 - Tilt: 64.4°
- Segment: 56-70 - Tilt: 64.6°
- Segment: 72-82 - Tilt: 56.3°
- Segment: 88-98 - Tilt: 48.2°
- Segment: 101-141 - Tilt: 38.3°
- Segment: 144-149 - Tilt: 15.6°
- Segment: 157-162 - Tilt: 15.2°
- Segment: 176-182 - Tilt: 16.6°
- Segment: 196-201 - Tilt: 22.7°
- Segment: 246-252 - Tilt: 27.8°
- Segment: 262-268 - Tilt: 32.5°
- Segment: 281-287 - Tilt: 35.2°
- Segment: 322-329 - Tilt: 42.3°
- Segment: 350-359 - Tilt: 50.3°
- Segment: 365-377 - Tilt: 57.8°
Structural assessment:
MAIDEN score = 28.9323
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]