ABC transporter, transmembrane region
Organism: Lyngbya sp.
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: A0YLU1
Pfam Acc: PF00664
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 8
Sequence positions:
: 32-55|79-105|173-193|271-321|431-470|493-508|512-521|526-539
Tilt angles:
- Segment: 32-55 - Tilt: 63.5°
- Segment: 79-105 - Tilt: 68.7°
- Segment: 173-193 - Tilt: 60.9°
- Segment: 271-321 - Tilt: 65.5°
- Segment: 431-470 - Tilt: 28.7°
- Segment: 493-508 - Tilt: 35.1°
- Segment: 512-521 - Tilt: 27.2°
- Segment: 526-539 - Tilt: 35.7°
Structural assessment:
MAIDEN score = -47.1425
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]