Transmembrane transporter, major facilitator family protein
Organism: Roseovarius nubinhibens
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: A3SLS2
Pfam Acc: PF07690
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 27.9 Å
Number of TM segments = 12
Sequence positions:
: 18-41|55-77|83-98|116-133|143-163|175-192|222-243|268-289|299-315|330-347|361-380|391-409
Tilt angles:
- Segment: 18-41 - Tilt: 39.5°
- Segment: 55-77 - Tilt: 31.2°
- Segment: 83-98 - Tilt: 17.8°
- Segment: 116-133 - Tilt: 39.9°
- Segment: 143-163 - Tilt: 5.9°
- Segment: 175-192 - Tilt: 22.1°
- Segment: 222-243 - Tilt: 25.7°
- Segment: 268-289 - Tilt: 30.3°
- Segment: 299-315 - Tilt: 9.1°
- Segment: 330-347 - Tilt: 17.5°
- Segment: 361-380 - Tilt: 16.8°
- Segment: 391-409 - Tilt: 14.6°
Structural assessment:
MAIDEN score = -32.4255
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]