Transmembrane transporter, major facilitator family protein
Organism: Maritimibacter alkaliphilus
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: A3VBC3
Pfam Acc: PF07690
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 29.0 Å
Number of TM segments = 12
Sequence positions:
: 16-33|45-64|77-95|98-116|139-160|165-180|209-234|259-283|289-307|315-335|353-371|380-401
Tilt angles:
- Segment: 16-33 - Tilt: 22.6°
- Segment: 45-64 - Tilt: 14.3°
- Segment: 77-95 - Tilt: 10.7°
- Segment: 98-116 - Tilt: 18.7°
- Segment: 139-160 - Tilt: 39.0°
- Segment: 165-180 - Tilt: 10.3°
- Segment: 209-234 - Tilt: 42.5°
- Segment: 259-283 - Tilt: 42.3°
- Segment: 289-307 - Tilt: 17.0°
- Segment: 315-335 - Tilt: 31.3°
- Segment: 353-371 - Tilt: 5.0°
- Segment: 380-401 - Tilt: 29.9°
Structural assessment:
MAIDEN score = -13.7512
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]