Trans-membrane water channel protein
Organism: Brassica juncea
Model: Theoretical SWISS-MODEL
Representation: Atomistic
Type: α-helical
UniProtKB AC: A4URF3
Pfam Acc: PF00230
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 34.2 Å
Number of TM segments = 6
Sequence positions:
: 47-78|81-106|108-154|172-195|210-246|254-276
Tilt angles:
- Segment: 47-78 - Tilt: 48.7°
- Segment: 81-106 - Tilt: 38.2°
- Segment: 108-154 - Tilt: 22.6°
- Segment: 172-195 - Tilt: 17.6°
- Segment: 210-246 - Tilt: 12.5°
- Segment: 254-276 - Tilt: 21.7°
Structural assessment:
MAIDEN score = -65.9928
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]