Transmembrane protein Vc20
Organism: Ciona intestinalis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: A4ZW67
Pfam Acc: PF00100
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.4 Å
Number of TM segments = 2
Sequence positions:
: 138-151|155-175
Tilt angles:
- Segment: 138-151 - Tilt: 51.0°
- Segment: 155-175 - Tilt: 45.2°
Structural assessment:
MAIDEN score = 61.1991
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]