Putative transmembrane transport protein (General substrate transporter)
Organism: Bradyrhizobium sp.
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: A5EJX3
Pfam Acc: PF07690
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 30.6 Å
Number of TM segments = 10
Sequence positions:
: 53-78|157-180|191-214|230-250|280-301|315-336|346-364|370-392|411-434|436-455
Tilt angles:
- Segment: 53-78 - Tilt: 45.6°
- Segment: 157-180 - Tilt: 39.9°
- Segment: 191-214 - Tilt: 4.7°
- Segment: 230-250 - Tilt: 29.6°
- Segment: 280-301 - Tilt: 25.9°
- Segment: 315-336 - Tilt: 16.7°
- Segment: 346-364 - Tilt: 11.9°
- Segment: 370-392 - Tilt: 33.5°
- Segment: 411-434 - Tilt: 30.4°
- Segment: 436-455 - Tilt: 19.6°
Structural assessment:
MAIDEN score = 53.4217
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]