Putative cation efflux system transmembrane protein
Organism: Roseobacter sp.
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: A6FM53
Pfam Acc: PF00873
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 29.0 Å
Number of TM segments = 10
Sequence positions:
: 8-28|396-415|439-459|472-498|528-548|866-885|887-907|921-939|975-991|1008-1030
Tilt angles:
- Segment: 8-28 - Tilt: 7.9°
- Segment: 396-415 - Tilt: 15.8°
- Segment: 439-459 - Tilt: 34.7°
- Segment: 472-498 - Tilt: 40.5°
- Segment: 528-548 - Tilt: 23.1°
- Segment: 866-885 - Tilt: 13.6°
- Segment: 887-907 - Tilt: 38.0°
- Segment: 921-939 - Tilt: 6.5°
- Segment: 975-991 - Tilt: 10.4°
- Segment: 1008-1030 - Tilt: 24.0°
Structural assessment:
MAIDEN score = -54.3114
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]