ABC transporter, transmembrane region:ABC transporter
Organism: Plesiocystis pacifica
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: A6GHP4
Pfam Acc: PF00005
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 36.0 Å
Number of TM segments = 6
Sequence positions:
: 40-71|86-111|164-188|190-218|262-299|311-331
Tilt angles:
- Segment: 40-71 - Tilt: 48.9°
- Segment: 86-111 - Tilt: 26.4°
- Segment: 164-188 - Tilt: 10.8°
- Segment: 190-218 - Tilt: 41.7°
- Segment: 262-299 - Tilt: 53.2°
- Segment: 311-331 - Tilt: 17.7°
Structural assessment:
MAIDEN score = -28.9029
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]