Putative transmembrane AcrB/D/F-family transporter
Organism: Bacteroides vulgatus
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: A6L696
Pfam Acc: PF00873
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 28.0 Å
Number of TM segments = 7
Sequence positions:
: 13-30|334-354|359-379|389-406|431-447|463-482|522-540
Tilt angles:
- Segment: 13-30 - Tilt: 21.1°
- Segment: 334-354 - Tilt: 19.5°
- Segment: 359-379 - Tilt: 35.8°
- Segment: 389-406 - Tilt: 12.5°
- Segment: 431-447 - Tilt: 0.3°
- Segment: 463-482 - Tilt: 10.1°
- Segment: 522-540 - Tilt: 6.7°
Structural assessment:
MAIDEN score = -53.0703
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]