Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2 precursor
Organism: Homo sapiens
Model: Theoretical SWISS-MODEL
Representation: Atomistic
Type: α-helical
UniProtKB AC: A6NDA9
Pfam Acc: PF00560
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 9
Sequence positions:
B: 83-89|91-100|107-113|115-124|131-137|139-148|155-161|163-173|178-198
Tilt angles:
B - Segment: 83-89 - Tilt: 11.7°
B - Segment: 91-100 - Tilt: 21.0°
B - Segment: 107-113 - Tilt: 13.4°
B - Segment: 115-124 - Tilt: 18.0°
B - Segment: 131-137 - Tilt: 15.5°
B - Segment: 139-148 - Tilt: 15.8°
B - Segment: 155-161 - Tilt: 17.3°
B - Segment: 163-173 - Tilt: 10.4°
B - Segment: 178-198 - Tilt: 23.4°
Structural assessment:
MAIDEN score = 66.1245
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]