Putative transmembrane protein
Organism: Kordia algicida
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: A9EBL2
Pfam Acc: PF02518
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 6
Sequence positions:
: 122-134|145-158|161-173|184-197|199-218|221-234
Tilt angles:
- Segment: 122-134 - Tilt: 17.7°
- Segment: 145-158 - Tilt: 21.2°
- Segment: 161-173 - Tilt: 25.8°
- Segment: 184-197 - Tilt: 44.6°
- Segment: 199-218 - Tilt: 55.3°
- Segment: 221-234 - Tilt: 37.1°
Structural assessment:
MAIDEN score = -27.6637
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]