Putative transporter transmembrane protein
Organism: Bordetella petrii
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: A9IUG9
Pfam Acc: PF07690
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 32.0 Å
Number of TM segments = 12
Sequence positions:
: 17-35|50-72|74-96|102-123|138-160|174-189|225-247|261-283|286-307|315-338|351-370|381-401
Tilt angles:
- Segment: 17-35 - Tilt: 28.1°
- Segment: 50-72 - Tilt: 26.0°
- Segment: 74-96 - Tilt: 16.3°
- Segment: 102-123 - Tilt: 21.2°
- Segment: 138-160 - Tilt: 22.2°
- Segment: 174-189 - Tilt: 17.6°
- Segment: 225-247 - Tilt: 41.6°
- Segment: 261-283 - Tilt: 26.6°
- Segment: 286-307 - Tilt: 11.3°
- Segment: 315-338 - Tilt: 34.8°
- Segment: 351-370 - Tilt: 4.8°
- Segment: 381-401 - Tilt: 22.9°
Structural assessment:
MAIDEN score = -34.0008
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]