Leucine-rich transmembrane protein
Organism: Culex quinquefasciatus
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: B0XLQ4
Pfam Acc: PF13855
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 13
Sequence positions:
: 109-117|125-137|144-150|154-163|168-174|179-190|195-201|203-211|219-225|229-238|242-248|278-287|290-298
Tilt angles:
- Segment: 109-117 - Tilt: 28.3°
- Segment: 125-137 - Tilt: 10.9°
- Segment: 144-150 - Tilt: 9.7°
- Segment: 154-163 - Tilt: 12.8°
- Segment: 168-174 - Tilt: 12.2°
- Segment: 179-190 - Tilt: 11.1°
- Segment: 195-201 - Tilt: 8.3°
- Segment: 203-211 - Tilt: 22.2°
- Segment: 219-225 - Tilt: 12.2°
- Segment: 229-238 - Tilt: 15.1°
- Segment: 242-248 - Tilt: 15.3°
- Segment: 278-287 - Tilt: 16.9°
- Segment: 290-298 - Tilt: 9.9°
Structural assessment:
MAIDEN score = 15.6582
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]