Transmembrane protein 1
Organism: Alternaria brassicicola
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: B6RIT9
Pfam Acc: PF00501
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 33.0 Å
Number of TM segments = 3
Sequence positions:
: 177-259|336-394|397-426
Tilt angles:
- Segment: 177-259 - Tilt: 15.8°
- Segment: 336-394 - Tilt: 5.9°
- Segment: 397-426 - Tilt: 40.8°
Structural assessment:
MAIDEN score = 53.2722
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]