Transmembrane protein 1
Organism: Alternaria brassicicola
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: B6RIT9
Pfam Acc: PF00501
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.0 Å
Number of TM segments = 7
Sequence positions:
: 35-52|60-73|136-143|151-168|213-258|337-367|398-423
Tilt angles:
- Segment: 35-52 - Tilt: 24.8°
- Segment: 60-73 - Tilt: 26.3°
- Segment: 136-143 - Tilt: 8.5°
- Segment: 151-168 - Tilt: 47.3°
- Segment: 213-258 - Tilt: 44.5°
- Segment: 337-367 - Tilt: 13.9°
- Segment: 398-423 - Tilt: 34.5°
Structural assessment:
MAIDEN score = 74.2920
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]