ABC transporter: Transmembrane protein Maltooligosaccharide uptake
Organism: Vibrio tasmaniensis
Model: Theoretical SWISS-MODEL
Representation: Atomistic
Type: α-helical
UniProtKB AC: B7VQJ1
Pfam Acc: PF00528
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 28.0 Å
Number of TM segments = 6
Sequence positions:
: 13-37|92-115|121-144|162-184|188-233|270-293
Tilt angles:
- Segment: 13-37 - Tilt: 46.1°
- Segment: 92-115 - Tilt: 43.8°
- Segment: 121-144 - Tilt: 21.9°
- Segment: 162-184 - Tilt: 43.7°
- Segment: 188-233 - Tilt: 56.0°
- Segment: 270-293 - Tilt: 54.0°
Structural assessment:
MAIDEN score = -57.0524
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]