Putative Cytochrome C biogenesis protein transmembrane region (DsbD-like) (CcdA)
Organism: Deinococcus deserti
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: C1D2R0
Pfam Acc: PF02683
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 6
Sequence positions:
: 31-45|61-81|97-107|142-157|169-184|200-209
Tilt angles:
- Segment: 31-45 - Tilt: 38.7°
- Segment: 61-81 - Tilt: 44.5°
- Segment: 97-107 - Tilt: 23.3°
- Segment: 142-157 - Tilt: 24.5°
- Segment: 169-184 - Tilt: 31.9°
- Segment: 200-209 - Tilt: 5.9°
Structural assessment:
MAIDEN score = -15.3885
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]