NADH-quinone oxidoreductase subunit N 1
Organism: Escherichia coli
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: C6E9S6
Pfam Acc: PF00361
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 24.6 Å
Number of TM segments = 11
Sequence positions:
: 72-87|109-122|124-139|163-179|204-225|239-255|270-285|300-316|322-338|385-402|407-422
Tilt angles:
- Segment: 72-87 - Tilt: 27.6°
- Segment: 109-122 - Tilt: 22.7°
- Segment: 124-139 - Tilt: 5.0°
- Segment: 163-179 - Tilt: 23.4°
- Segment: 204-225 - Tilt: 28.1°
- Segment: 239-255 - Tilt: 23.2°
- Segment: 270-285 - Tilt: 16.6°
- Segment: 300-316 - Tilt: 19.2°
- Segment: 322-338 - Tilt: 21.5°
- Segment: 385-402 - Tilt: 22.6°
- Segment: 407-422 - Tilt: 11.8°
Structural assessment:
MAIDEN score = -53.2530
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]