NADH-quinone oxidoreductase subunit N 1
Organism: Escherichia coli
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: C6E9S6
Pfam Acc: PF00361
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 30.0 Å
Number of TM segments = 12
Sequence positions:
: 71-89|107-124|126-143|159-179|204-232|236-255|272-291|294-312|325-343|379-397|411-429|453-471
Tilt angles:
- Segment: 71-89 - Tilt: 15.3°
- Segment: 107-124 - Tilt: 19.6°
- Segment: 126-143 - Tilt: 14.9°
- Segment: 159-179 - Tilt: 33.4°
- Segment: 204-232 - Tilt: 36.0°
- Segment: 236-255 - Tilt: 15.8°
- Segment: 272-291 - Tilt: 21.3°
- Segment: 294-312 - Tilt: 12.6°
- Segment: 325-343 - Tilt: 13.4°
- Segment: 379-397 - Tilt: 9.2°
- Segment: 411-429 - Tilt: 5.4°
- Segment: 453-471 - Tilt: 8.1°
Structural assessment:
MAIDEN score = -34.8715
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]