NADH-quinone oxidoreductase subunit N 1
Organism: Escherichia coli
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: C6E9S6
Pfam Acc: PF00361
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 26.1 Å
Number of TM segments = 12
Sequence positions:
: 71-89|109-124|126-141|159-178|202-227|238-255|269-286|298-316|323-340|384-400|407-422|456-471
Tilt angles:
- Segment: 71-89 - Tilt: 23.8°
- Segment: 109-124 - Tilt: 17.9°
- Segment: 126-141 - Tilt: 13.5°
- Segment: 159-178 - Tilt: 19.2°
- Segment: 202-227 - Tilt: 43.1°
- Segment: 238-255 - Tilt: 23.4°
- Segment: 269-286 - Tilt: 27.3°
- Segment: 298-316 - Tilt: 18.6°
- Segment: 323-340 - Tilt: 8.5°
- Segment: 384-400 - Tilt: 15.4°
- Segment: 407-422 - Tilt: 9.6°
- Segment: 456-471 - Tilt: 8.9°
Structural assessment:
MAIDEN score = -37.7395
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]