NADH-quinone oxidoreductase subunit N 1
Organism: Escherichia coli
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: C6E9S6
Pfam Acc: PF00361
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 22.2 Å
Number of TM segments = 12
Sequence positions:
: 71-88|107-125|127-140|159-175|208-228|241-255|272-285|302-317|321-336|390-403|407-421|453-469
Tilt angles:
- Segment: 71-88 - Tilt: 41.8°
- Segment: 107-125 - Tilt: 45.4°
- Segment: 127-140 - Tilt: 19.1°
- Segment: 159-175 - Tilt: 31.7°
- Segment: 208-228 - Tilt: 20.3°
- Segment: 241-255 - Tilt: 32.5°
- Segment: 272-285 - Tilt: 17.1°
- Segment: 302-317 - Tilt: 26.9°
- Segment: 321-336 - Tilt: 29.8°
- Segment: 390-403 - Tilt: 30.7°
- Segment: 407-421 - Tilt: 31.6°
- Segment: 453-469 - Tilt: 38.4°
Structural assessment:
MAIDEN score = -42.5281
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]