NADH-quinone oxidoreductase subunit N 1
Organism: Escherichia coli
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: C6E9S6
Pfam Acc: PF00361
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 24.0 Å
Number of TM segments = 12
Sequence positions:
: 70-88|103-122|126-141|162-179|206-226|241-258|268-284|302-316|321-335|389-403|405-418|456-470
Tilt angles:
- Segment: 70-88 - Tilt: 45.8°
- Segment: 103-122 - Tilt: 46.1°
- Segment: 126-141 - Tilt: 29.9°
- Segment: 162-179 - Tilt: 33.1°
- Segment: 206-226 - Tilt: 22.5°
- Segment: 241-258 - Tilt: 35.7°
- Segment: 268-284 - Tilt: 17.0°
- Segment: 302-316 - Tilt: 33.4°
- Segment: 321-335 - Tilt: 30.3°
- Segment: 389-403 - Tilt: 28.5°
- Segment: 405-418 - Tilt: 14.1°
- Segment: 456-470 - Tilt: 26.4°
Structural assessment:
MAIDEN score = -41.2356
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]