NADH-quinone oxidoreductase subunit N 1
Organism: Escherichia coli
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: C6E9S6
Pfam Acc: PF00361
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 23.0 Å
Number of TM segments = 12
Sequence positions:
: 75-89|106-120|128-141|162-176|208-228|240-251|274-289|297-311|327-341|381-395|414-428|455-470
Tilt angles:
- Segment: 75-89 - Tilt: 24.2°
- Segment: 106-120 - Tilt: 33.5°
- Segment: 128-141 - Tilt: 5.4°
- Segment: 162-176 - Tilt: 33.6°
- Segment: 208-228 - Tilt: 40.3°
- Segment: 240-251 - Tilt: 23.6°
- Segment: 274-289 - Tilt: 11.1°
- Segment: 297-311 - Tilt: 6.4°
- Segment: 327-341 - Tilt: 13.4°
- Segment: 381-395 - Tilt: 7.9°
- Segment: 414-428 - Tilt: 2.1°
- Segment: 455-470 - Tilt: 16.0°
Structural assessment:
MAIDEN score = -70.0719
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]