NADH-quinone oxidoreductase subunit N 1
Organism: Escherichia coli
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: C6E9S6
Pfam Acc: PF00361
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 23.4 Å
Number of TM segments = 12
Sequence positions:
: 72-86|107-121|123-139|158-176|208-228|240-254|276-292|295-310|327-341|381-395|416-430|454-468
Tilt angles:
- Segment: 72-86 - Tilt: 15.6°
- Segment: 107-121 - Tilt: 42.1°
- Segment: 123-139 - Tilt: 13.6°
- Segment: 158-176 - Tilt: 38.0°
- Segment: 208-228 - Tilt: 35.2°
- Segment: 240-254 - Tilt: 20.7°
- Segment: 276-292 - Tilt: 24.5°
- Segment: 295-310 - Tilt: 7.3°
- Segment: 327-341 - Tilt: 24.2°
- Segment: 381-395 - Tilt: 16.0°
- Segment: 416-430 - Tilt: 16.6°
- Segment: 454-468 - Tilt: 13.7°
Structural assessment:
MAIDEN score = -10.2808
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]