NADH-quinone oxidoreductase subunit N 1
Organism: Escherichia coli
Model: Theoretical
Representation: Atomistic
Type: α-helical
UniProtKB AC: C6E9S6
Pfam Acc: PF00361
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 12
Sequence positions:
: 79-90|107-118|129-141|160-173|207-231|237-251|271-285|298-312|331-343|382-396|408-422|459-471
Tilt angles:
- Segment: 79-90 - Tilt: 28.8°
- Segment: 107-118 - Tilt: 24.7°
- Segment: 129-141 - Tilt: 5.2°
- Segment: 160-173 - Tilt: 21.0°
- Segment: 207-231 - Tilt: 50.2°
- Segment: 237-251 - Tilt: 40.3°
- Segment: 271-285 - Tilt: 32.0°
- Segment: 298-312 - Tilt: 43.2°
- Segment: 331-343 - Tilt: 27.1°
- Segment: 382-396 - Tilt: 36.9°
- Segment: 408-422 - Tilt: 41.3°
- Segment: 459-471 - Tilt: 28.9°
Structural assessment:
MAIDEN score = -18.5789
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]