Putative drug transport transmembrane protein
Organism: Vibrio alginolyticus
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: D0X2Z4
Pfam Acc: PF07690
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 22.5 Å
Number of TM segments = 10
Sequence positions:
: 46-60|78-95|103-118|133-148|169-183|198-212|247-267|277-291|367-388|393-406
Tilt angles:
- Segment: 46-60 - Tilt: 23.7°
- Segment: 78-95 - Tilt: 38.0°
- Segment: 103-118 - Tilt: 12.5°
- Segment: 133-148 - Tilt: 20.5°
- Segment: 169-183 - Tilt: 27.5°
- Segment: 198-212 - Tilt: 24.1°
- Segment: 247-267 - Tilt: 49.7°
- Segment: 277-291 - Tilt: 15.8°
- Segment: 367-388 - Tilt: 54.3°
- Segment: 393-406 - Tilt: 19.2°
Structural assessment:
MAIDEN score = -7.6039
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]