Putative drug transport transmembrane protein
Organism: Vibrio alginolyticus
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: D0X2Z4
Pfam Acc: PF07690
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 29.0 Å
Number of TM segments = 10
Sequence positions:
: 44-61|76-96|103-121|130-149|165-184|196-214|243-264|278-296|365-384|394-411
Tilt angles:
- Segment: 44-61 - Tilt: 13.3°
- Segment: 76-96 - Tilt: 11.2°
- Segment: 103-121 - Tilt: 15.6°
- Segment: 130-149 - Tilt: 33.5°
- Segment: 165-184 - Tilt: 21.5°
- Segment: 196-214 - Tilt: 14.1°
- Segment: 243-264 - Tilt: 36.0°
- Segment: 278-296 - Tilt: 3.7°
- Segment: 365-384 - Tilt: 29.6°
- Segment: 394-411 - Tilt: 14.6°
Structural assessment:
MAIDEN score = -18.9176
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]