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Cytochrome C biogenesis protein transmembrane region

Organism: Prevotella buccalis
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical

UniProtKB AC: D1W895
Pfam Acc: PF11412


Membrane assignment:

Output PDB file Download

Hydrophobic thickness = 19.8 Å

Number of TM segments = 3

Sequence positions:
: 549-577|586-601|628-657

Tilt angles:
- Segment: 549-577 - Tilt: 53.9°
- Segment: 586-601 - Tilt: 54.2°
- Segment: 628-657 - Tilt: 12.7°


Structural assessment:

MAIDEN score = 23.4348
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.


Scores for all residue pairs Download




[creation date: Sep-08-2016]