Abc transmembrane transporter
Organism: Naegleria gruberi
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: D2VV17
Pfam Acc: PF01061
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 22.0 Å
Number of TM segments = 5
Sequence positions:
: 228-241|243-251|256-264|270-293|296-328
Tilt angles:
- Segment: 228-241 - Tilt: 23.7°
- Segment: 243-251 - Tilt: 26.8°
- Segment: 256-264 - Tilt: 27.2°
- Segment: 270-293 - Tilt: 21.0°
- Segment: 296-328 - Tilt: 62.4°
Structural assessment:
MAIDEN score = 1.0179
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]