Transmembrane protein
Organism: Polysphondylium pallidum
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: D3B5D6
Pfam Acc: PF00153
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 30.6 Å
Number of TM segments = 6
Sequence positions:
: 23-46|81-100|141-167|184-213|231-258|282-308
Tilt angles:
- Segment: 23-46 - Tilt: 20.8°
- Segment: 81-100 - Tilt: 41.3°
- Segment: 141-167 - Tilt: 25.8°
- Segment: 184-213 - Tilt: 52.5°
- Segment: 231-258 - Tilt: 33.1°
- Segment: 282-308 - Tilt: 43.9°
Structural assessment:
MAIDEN score = -36.4778
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]