Transmembrane protein
Organism: Polysphondylium pallidum
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: D3B9F7
Pfam Acc: PF00230
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 22.0 Å
Number of TM segments = 4
Sequence positions:
: 36-57|83-99|112-134|164-180
Tilt angles:
- Segment: 36-57 - Tilt: 55.3°
- Segment: 83-99 - Tilt: 31.8°
- Segment: 112-134 - Tilt: 13.5°
- Segment: 164-180 - Tilt: 48.1°
Structural assessment:
MAIDEN score = 29.6306
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]