Transmembrane protein
Organism: Polysphondylium pallidum
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: D3B9F7
Pfam Acc: PF00230
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.0 Å
Number of TM segments = 3
Sequence positions:
: 31-59|85-100|124-135
Tilt angles:
- Segment: 31-59 - Tilt: 60.9°
- Segment: 85-100 - Tilt: 24.8°
- Segment: 124-135 - Tilt: 15.5°
Structural assessment:
MAIDEN score = -16.9491
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]