Transmembrane protein
Organism: Polysphondylium pallidum
Model: Theoretical ModBase
Representation: Atomistic
Type: α-helical
UniProtKB AC: D3B9F7
Pfam Acc: PF00230
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.0 Å
Number of TM segments = 4
Sequence positions:
: 43-57|88-106|118-135|137-171
Tilt angles:
- Segment: 43-57 - Tilt: 34.9°
- Segment: 88-106 - Tilt: 47.8°
- Segment: 118-135 - Tilt: 41.9°
- Segment: 137-171 - Tilt: 6.1°
Structural assessment:
MAIDEN score = -21.7533
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]